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Publications

2023

RII authors are marked with an asterisk(*); — indexed by Scopus; — indexed by Web of Science.

Research papers:

  1. 5-(Perylen-3-ylethynyl)uracil as an antiviral scaffold: Potent suppression of enveloped virus reproduction by 3-methyl derivatives in vitro
    Chistov A.A., Chumakov S.P., Mikhnovets I.E., Nikitin T.D., Slesarchuk N.A., Uvarova V.I., Rubekina A.A., Nikolaeva* Yu.V., Radchenko E.V., Khvatov E.V., Orlov A.A., Frolenko V.S., Sukhorukov M.V., Kolpakova E.S., Shustova E.Y., Galochkina* A.V., Streshnev Ph.P., Osipov E.M., Sapozhnikova K.A., Moiseenko A.V., Brylev V.A., Proskurin G.V., Dokukin Yu.S., Kutyakov S.V., Aralov A.V., Korshun V.A., Strelkov S.V., Palyulin V.A., Ishmukhametov A.A., Shirshin E.A., Osolodkin D.I., Shtro* A.A., Kozlovskaya L.I., Alferova V.A., Ustinov A.V.
    Antiviral Research — 2023. — Vol. 209. — Issue. . — pp. 105508-
    DOI: 10.1016/j.antiviral.2022.105508
  2. A Genome of Temperate Enterococcus Bacteriophage Placed in a Space of Pooled Viral Dark Matter Sequences
    Pchelin I.M., Tkachev P.V., Azarov D.V., Gorshkov* A.N., Drachko D.O., Zlatogursky V.V., Dmitriev A.V., Goncharo A.E.
    Viruses — 2023. — Vol. 15. — Issue. 1. — pp. 216-
    DOI: 10.3390/v15010216
  3. Age differences in comorbidities, presenting symptoms and outcomes of influenza illness requiring hospitalization: a worldwide perspective from the Global Influenza Hospital Surveillance Network
    Andrew, M.K., Pott, H., Staadegaard, L., Paget, J., Chaves, S.S., Ortiz, J.R., McCauley, J., Bresee, J., Nunes, M.C., Baumeister, E. and Raboni, S.M., Giamberardino H.I.G., McNeil S.A, Gomez D., Zhang T., Vanhems P., Koul P.A., Coulibaly D., Otieno N.A., Dbaibo G., Almeida M.L.G., Laguna-Torres V.A., Drăgănescu A.C., Burtseva E., Sominina* A., Danilenko* D., Medić S., Diez-Domingo J., Lina B. on behalf of GIHSN investigators
    Open Forum Infectious Diseases — 2023. — Vol. . — Issue. . — pp. -
    DOI: 10.1093/ofid/ofad244
  4. An acceptance-based, intersectional stigma coping intervention for people with HIV who inject drugs—a randomized clinical trial
    Luoma J.B., Rossi S.L., Sereda Y., Pavlov N., Toussova O., Vetrova M., Bendiks S., Kiriazova T., Krupitsky E., Lioznov* D., Blokhina E., Ludi S., Luzne K.
    TheLancetRegional Health-Europe — 2023. — Vol. 28. — Issue. . — pp. 100611-
    DOI: 10.1016/j.lanepe.2023.100611
  5. An Early SARS-CoV-2 Omicron Outbreak in a Dormitory in Saint Petersburg, Russia
    Klink G.V., Danilenko* D.M., Komissarov* A.B., Yolshin* N., Shneider* O.V., Shcherbak S., Nabieva E., Shvyrev N., Konovalova* N., Zheltukhina* A., Fadeev* A., Komissarova* K., Ksenafontov* A., Musaeva* T., Eder* V., Pisareva* M., Nekrasov* P.A., Shchur V., Bazykin* G.A., Lioznov* D.
    Viruses — 2023. — Vol. 15. — Issue. 7. — pp. 1415-
    DOI: 10.3390/v15071415
  6. An Ultrastructural and Immunohistochemical Assessment of Polyposis Tissue in Chronic Polyposis Rhinosinusitis
    Gorshkov* A.N., Varyushina* E.A., Bezrukova E.V., Aflitonov M.A., Simbirtsev A.S.
    Cell and Tissue Biology — 2023. — Vol. 17. — Issue. 1. — pp. 83-95
    DOI: 10.1134/S1990519X23010042
  7. Bivalent omicron (BA.1) booster vaccination against SARS-CoV-2
    Vasin* A.V., Stukova* M.A.
    The Lancet Infectious Diseases — 2023. — Vol. . — Issue. . — pp. -
    DOI: 10.1016/S1473-3099(23)00189-5
  8. Comparative Study of the Myocardium of Patients from Four COVID-19 Waves
    Mitrofanova L.B., Makarov I.A., Gorshkov* A.N., Runov A.L., Vonsky M.S., Pisareva* M.M., Komissarov* A.B., Makarova T.A., Li Q., Karonova T.L., Konradi A.O., Shlaykhto E.V.
    Diagnostics — 2023. — Vol. 13. — Issue. 9. — pp. 1645-
    DOI: 10.3390/diagnostics13091645
  9. Copolymers of Sodium Styrene Sulfonate and 2-Deoxy-2-methacrylamido-D-glucose with Antiviral Activity
    Panarin E.F., Zhuravskaya O.N., Shtro* A.A.
    Polymer Science, Series B — 2023. — Vol. . — Issue. . — pp. 1-4
    DOI: 10.1134/S1560090423700793
  10. Correlates of Intersectional HIV and Substance Use Stigma Affecting People with HIV and Substance Use in St. Petersburg, Russia
    Lodi S., Rossi S.L., Bendiks S., Gnatienko N., Lloyd-Travaglini C., Vetrova M., Toussova O., Bushara N., Blokhina E., Krupitsky E., Ekstrand M.L., Lioznov* D., Samet J.H., Lunze K.
    AIDS and Behavior — 2023. — Vol. 27. — Issue. 2. — pp. 462-472
    DOI: 10.1007/s10461-022-03781-8
  11. COVID-19 Associated Vasculitis Confirmed by the Tissues RT-PCR: A Case Series Report
    Belozerov K.E., Avrusin I.S., Andaryanova L.I., Guseva A.M., Shogenova Z.S., Belanovich I.N., Lobacheva A.V., Kornishina T.L., Isupova E.A., Masalova V.V., Kalashnikova O.V., Nokhrin A.V., Panova T.F., Dutova Yu.P., Myshkovskaya S.L., Kostyunin K.Y., Komissarov* A.B., Chasnyk V.G., Bregel L.V., Kostik M.M.
    Biomedicines — 2023. — Vol. 11. — Issue. 3. — pp. 870-
    DOI: 10.3390/biomedicines11030870
  12. Evaluation of the immunotoxicity and allergenicity of a new intranasal influenza vector vaccine against tuberculosis carrying TB10.4 and HspX antigens
    Stosman* K.I., Aleksandrov* A.G., Sivak* K.V., Buzitskaya* Z.V., Stukova* M.A.
    Iranian Journal of Basic Medical Sciences — 2023. — Vol. 26. — Issue. 5. — pp. 558-563
    DOI: 10.22038/IJBMS.2023.68440.14936
  13. Immunogenicity and safety of a recombinant adenovirus type-5 COVID-19 vaccine in adults: Data from a randomised, double-blind, placebo-controlled, single-dose, phase 3 trial in Russia
    Lioznov* D.A., Amosova* I.V., Sheetikov S.A., Zornikova K.V., Serdyuk Y., Efimov G.A., Tsyferov M., Khmelevskii M., Afanasiev A., Khomyakova N., Zubkov D. Tikhonov A., Zhu T., Barreto L., Dzutseva V.
    PLoS ONE — 2023. — Vol. 18. — Issue. 3. — pp. e0278878-
    DOI: 10.1371/journal.pone.0278878
  14. Influenza A(H1N1)pdm09 Virus Aggravates Pathology of Blood Vessels in Wistar Rats with Premorbid Acute Cardiomyopathy
    Marchenko* V., Zelinskaya I., Toropova Y., Podyacheva E., Martynov M., Mukhametdinova D., Lioznov* D., Zhilinskaya* I.N.
    Viruses — 2023. — Vol. 15. — Issue. 5. — pp. 1114-
    DOI: 10.3390/v15051114
  15. Inside and outside of virus-like particles HBc and HBc/4M2e: A comprehensive study of the structure
    Egorov* V.V., Shvetsov A.V., Pichkur E.B., Shaldzhyan* A.A., Zabrodskaya* Ya.A., Vinogradova D.S., Nekrasov* P.A., Gorshkov* A.N., Garmay Yu.P., Kovaleva* A.A., Stepanova* L.A., Tsybalova* L.M., Shtam T.A., Myasnikov A.G., Konevega A.L.
    Biophysical Chemistry — 2023. — Vol. 293. — Issue. . — pp. 106943-
    DOI: 10.1016/j.bpc.2022.106943
  16. Kinetics of interferon-λ and receptor expression in response to in vitro respiratory viral infection
    Lozhkov* A.A., Yolshin* N.D., Baranovskaya* I.L., Plotnikova* M.A., Sergeeva* M.V., Gyulikhandanova* N.E., Klotchenko* S.A., Vasin* A.V.
    Acta Virologica — 2023. — Vol. 67. — Issue. 1. — pp. 99-108
    DOI: 10.4149/av_2023_110
  17. New Inhibitors of Respiratory Syncytial Virus (RSV) Replication Based on Monoterpene-Substituted Arylcoumarins
    Khomenko, T.M., Shtro*, A.A., Galochkina*, A.V., Nikolaeva*, Y.V., Garshinina*, A.V., Borisevich, S.S., Korchagina, D.V., Volcho, K.P. and Salakhutdinov, N.F.
    Molecules — 2023. — Vol. 28. — Issue. 6. — pp. 2673-
    DOI: 10.3390/molecules28062673
  18. Nirsevimab binding-site conservation in respiratory syncytial virus fusion glycoprotein worldwide between 1956 and 2021: an analysis of observational study sequencing data
    Wilkins D., Langedijk A.C., Lebbink R.J., Morehouse C., Abram M.E., Ahani B., Aksyuk A.A., Baraldi E., Brady T., Chen A.T., Chi H., Cohen R., Danilenko* D.M., Gopalakrishnan G., Greenough A., Heikkinen T., Hosoya M., Keller C., Kelly E.J., Kragten-Tabatabaie L., Martinón-Torres F., Mascareñas de Los Santos A.H., Nunes M.C., Palomino M.A., Papenburg J., Pernica J.M., Richmond P., Stein R.T., Tuffy K.M., Verwey C., Esser M.T, Tabor D.E., Bont L.J.
    The Lancet Infectious Diseases — 2023. — Vol. . — Issue. . — pp. -
    DOI: 10.1016/S1473-3099(23)00062-2
  19. Non-invasive transcutaneous influenza immunization using vaccine-loaded vaterite particles
    Svenskaya Y.I., Lengert E.V., Tarakanchikova Y.V., Muslimov A.R., Saveleva M.S., Genina E.A., Radchenko I.L., Stepanova L.A., Vasin* A.V., Sukhorukov G.B. and Tsybalova* L.M.
    Journal of Materials Chemistry B — 2023. — Vol. 11. — Issue. 17. — pp. 3860-3870
    DOI: 10.1039/D2TB02779H
  20. Peptide from NSP7 is able to form amyloid-like fibrils: Artifact or challenge to drug design?
    Garmay Y., Rubel A., Egorov* V.
    Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics — 2023. — Vol. 1871. — Issue. 2. — pp. 140884-
    DOI: 10.1016/j.bbapap.2022.140884
  21. Plant-Produced Nanoparticles Based on Artificial Self-Assembling Peptide Bearing the Influenza M2e Epitope
    Blokhina E.A., Mardanova E.S., Zykova A.A., Stepanova* L.A., Shuklina* M.A., Tsybalova* L.M., Ravin N.V
    Plants — 2023. — Vol. 12. — Issue. 11. — pp. 2228-
    DOI: 10.3390/plants12112228
  22. Preclinical Evaluation of TB/FLU-04L—An Intranasal Influenza Vector-Based Boost Vaccine against Tuberculosis
    Shurygina* A.-P., Zabolotnykh N., Vinogradova T., Khairullin B., Kassenov M., Nurpeisova A., Sarsenbayeva G., Sansyzbay A., Vasilyev* K., Buzitskaya* J., Egorov* A., Stukova* M.
    International Journal of Molecular Sciences — 2023. — Vol. 24. — Issue. 8. — pp. 7439-
    DOI: 10.3390/ijms24087439
  23. Properties of recombinant extracellular N-terminal domain of human high-affinity copper transporter 1 (hNdCTR1) and its interactions with Cu(ii) and Ag(i) ions
    Orlov I.A., Sankova T.P., Skvortsov A.N., Klotchenko* S.A., Sakhenberg E.I., Mekhova A.A., Kiseleva I.V., Ilyechova E.Y., Puchkova L.V.
    Dalton Transactions — 2023. — Vol. 52. — Issue. 11. — pp. 3403-3419
    DOI: 10.1039/D2DT04060C
  24. Reorganization and Suppression of Store-Operated Calcium Entry in Podocytes of Type 2 Diabetic Rats
    Gusev K., Shalygin A., Kolesnikov D., Shuyskiy L., Makeenok S., Glushankova L., Sivak* K., Yakovlev* K., Orshanskaya* Y., Wang G., Bakhtyukov A., Derkach K., Shpakov A., Kaznacheyeva E.
    International Journal of Molecular Sciences — 2023. — Vol. 24. — Issue. 8. — pp. 7259-
    DOI: 10.3390/ijms24087259
  25. Results from the second WHO external quality assessment for the molecular detection of respiratory syncytial virus, 2019-2020
    Williams T., Jackson S., Barr I., Bi S., Bhiman J., Ellis J., von Gottberg A., Lindstrom S., Peret T., Rughooputh S., Viegas V., Hirve S., Zambon V., Zhang W., WHO RSV Surveillance Group (Dakhilalla A., …, Pisareva* M., …, Deng Y. M.)
    Influenza and Other Respiratory Viruses — 2023. — Vol. 17. — Issue. 1. — pp. e13073-
    DOI: 10.1111/irv.13073
  26. Safety and Immunogenicity of Betuvax-CoV-2, an RBD-Fc-Based SARS-CoV-2 Recombinant Vaccine: Preliminary Results of the First-in-Human, Randomized, Double-Blind, Placebo-Controlled Phase I/II Clinical Trial
    Kudriavtsev A.V., Vakhrusheva A. V., Kryuchkov N.A., Frolova M. E., Blagodatskikh K.A., Ivanishin T. V., Djonovic M., Romanovskaya-Romanko* E.A., Kovalenko A.N., Lioznov* D.A., Zubkova* T.G., Teplykh S.V., Oseshnyuk R.A., Stukova* M.A., Krasilnikov* I.V.
    Vaccines — 2023. — Vol. 11. — Issue. 2. — pp. 326-
    DOI: 10.3390/vaccines11020326
  27. SARS-CoV-2 escape from cytotoxic T cells during long-term COVID-19
    Stanevich* O.V., Alekseeva E.I., Sergeeva* M.V., Fadeev* A.V., Komissarova* K.S., Ivanova* A.A., Simakova T.S., Vasilyev* K.A., Shurygina* A.P., Stukova* M.A., Safina K.R., Nabieva E.R., Garushyants S.K., Klink G.V., Bakin E.A., Zabutova J.V., Kholodnaia A.N., Lukina O.V., Skorokhod I.A., Ryabchikova V.V., Medvedeva N.V., Lioznov* D.A., Danilenko* D.M., Chudakov D.M., Komissarov* A.B., Bazykin G.A.
    Nature Communications — 2023. — Vol. 14. — Issue. . — pp. 149-
    DOI: 10.1038/s41467-022-34033-x
  28. Structural and Immunoreactivity Properties of the SARS-CoV-2 Spike Protein upon the Development of an Inactivated Vaccine
    Kordyukova L.V. , Moiseenko A.V., Serebryakova M.V., Shuklina* M.A., Sergeeva* M.V., Lioznov* D.A., Shanko A.V.
    Viruses — 2023. — Vol. 15. — Issue. 2. — pp. 480-
    DOI: 10.3390/v15020480
  29. The impacts of COVID-19 on structural inequities faced by people living with HIV who inject drugs: A qualitative study in St. Petersburg, Russia
    Carroll J.J., Rossi S.L., Vetrova M.V., Blokhina E., Sereda Y., Lioznov* D., Luoma J., Kiriazova T., Lunze K.
    International Journal of Drug Policy — 2023. — Vol. 117. — Issue. . — pp. 104060-
    DOI: 10.1016/j.drugpo.2023.104060
  30. Uncertainty Estimation for Quantitative Agarose Gel Electrophoresis of Nucleic Acids
    Semenov K., Taraskin* A., Yurchenko A., Baranovskaya I., Purvinsh L., Gyulikhandanova* N., Vasin* A.
    Sensors — 2023. — Vol. 23. — Issue. 4. — pp. 1999-
    DOI: 10.3390/s23041999
  31. Virally Suppressed People Living with HIV Who Use Opioids Have Diminished Latency Reversal
    Basukala B., Rossi S., Bendiks S., Gnatienko N., Patts G., Krupitsky E., Lioznov* D., So-Armah K., Sagar M., Cheng C., Henderson A.J.
    Viruses — 2023. — Vol. 15. — Issue. 2. — pp. 415-
    DOI: 10.3390/v15020415
  32. Virological and Genetic Characterization of the Unusual Avian Influenza H14Nx Viruses in the Northern Asia
    Dubovitskiy N., Derko A., Sobolev I., Prokopyeva E., Murashkina T., Solomatina M., Kurskaya O., Komissarov* A., Fadeev* A., Danilenko* D., Petrova* P., Mine J., Tsunekuni R., Uchida Y., Saito T., Shestopalov A., Sharshov K.
    Viruses — 2023. — Vol. 15. — Issue. 3. — pp. 734-
    DOI: 10.3390/v15030734

2022 and older